CDS

Accession Number TCMCG017C03625
gbkey CDS
Protein Id OMP09829.1
Location join(34590..34683,34765..35081)
GeneID InterPro:IPR009806
Organism Corchorus olitorius
locus_tag COLO4_05100

Protein

Length 136aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01012155.1
Definition Photosystem II PsbW, class 2 [Corchorus olitorius]
Locus_tag COLO4_05100

EGGNOG-MAPPER Annotation

COG_category S
Description Photosystem II reaction center W protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00194        [VIEW IN KEGG]
KEGG_ko ko:K02721        [VIEW IN KEGG]
EC -
KEGG_Pathway ko00195        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
map00195        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
GOs GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009534        [VIEW IN EMBL-EBI]
GO:0009535        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009579        [VIEW IN EMBL-EBI]
GO:0010109        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031976        [VIEW IN EMBL-EBI]
GO:0031984        [VIEW IN EMBL-EBI]
GO:0034357        [VIEW IN EMBL-EBI]
GO:0042548        [VIEW IN EMBL-EBI]
GO:0042549        [VIEW IN EMBL-EBI]
GO:0042651        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043467        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044434        [VIEW IN EMBL-EBI]
GO:0044435        [VIEW IN EMBL-EBI]
GO:0044436        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0055035        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCAACCATCTCCGCAAGCACCCCGACCTCATCAATCACTCGTGCAGCTCTTGCACACAAGCCATCACTAAGGGTGGCCCCAGCTGCCATTGGGTTGCCAACAATGGGAAAGAAGGGAAGAGTTGTATGTTCCGTGGAGAAGAAGCCTTCTTCTGTTGAGGAGAAAGGGTCAAAAATGGGAATGAGTGCATCATTGTTGGCCGCAGCATGCGCAGCTACCATGTCAAGCCCAGCAGCCATGGCTCTGGTGGACGAGAGAATGTCGACTGAAGGAACTGGACTTCCCTTTGGGTTGAGCAACAACCTTCTTGGGTGGATTCTGTTTGGTGTATTCGGCTTGATTTGGGCACTTTACTTTGTTTACACTTCTTCCCTTGACGAGGATGAGGAATCTGGATTGTCTCTCTAA
Protein:  
MATISASTPTSSITRAALAHKPSLRVAPAAIGLPTMGKKGRVVCSVEKKPSSVEEKGSKMGMSASLLAAACAATMSSPAAMALVDERMSTEGTGLPFGLSNNLLGWILFGVFGLIWALYFVYTSSLDEDEESGLSL